Winners

Open Category

Grand Prize

Winning Team: MagiXterial

Team Leader: Yifeng Tang

Team members: Qingchuan Yang, Han Xu, Zuochao Zhao, Huishuang Tan

Summary:
-Compared traditional ML methods with neural networks on predicting alloy properties from compositions
-Proposed a new stacking model which uses GBDT trees as featurizer followed by a neural network regressor
-Compared the performance of three methods on predicting alloy compositions from properties: Direct Backward NN Modelling, Iterative Searching and Optimization and Generative Model

First Prize

Winning Team: AI.Rex

Team Leader: Yifeng Tang

Team members: Huishuang Tan, Hanzhang Liu, Jiayu Qin, Wanxiang Shen, Long Qian

Summary:
In chemical synthesis planning, retrosynthsis analysis tools can readily provide numerous synthetic paths, but that is beyond the capacity of experimental validation. Hence, evaluating the reaction feasibility accuractely and efficiently is vital in reducing the number of proposed paths and only retaining those have higher chance of success in wet lab. We successfully built models based on reaction SMILES or reaction graph, and achieved reasonably high test accuracy in both approches (>90%). We managed to integrate reactivity-related Quantum Mechanics descriptors into the feasibility prediction model and boosted the mode performance.

Second Prize

Winning Team: OMX

Team Leader: Wanxiang Shen

Team members: Wanxiang Shen

Summary:
The original intention was to establish an interpretable xAI-based omics machine learning model and algorithm flow for disease prediction, diagnosis and identification of key markers. The customized multi-channel AggMapNet outperformed state-of-the-art machine learning models, and the interpretable module of AggMapNet identified key metabolites or proteins for Covid-19 tests, and the predictions of disease severity were highly consistent with the biomarkers or biological mechanisms reported in the literature.

Winning Team: Alpha-Spec

Team Leader: Jian Song

Team members: Liqi Yan

Summary:
Deep learning technology was used to identify whether the secondary spectrum collected by the mass spectrometer were signal or noise. Alpha-Spec used an advanced deep learning module, Transformer, and the model was trained for 7 rounds. The deep learning model of Alpha-Spec achieved the recognition of spectral quality based solely on spectra (acc: ~70%). The spectra quality scoring system of the Alpha-Spec can improve DDA identification (PSM: ~3.3%).

Third Prize

Winning Team: TQL

Team Leader: Zheng Cao

Team members: Tiantao Liu

Summary:
The team proposed a synthesis evaluation system to analyze the synthetic accessibility and identify the possible side products.

Winning Team: CRITICAL

Team Leader: Ke Liu

Team members: Shangde Gao, Kaifan Yang, Yichao Fu

Summary:
The team built a model comprised of input layer, embedding layer, aggregation layer, attention layer and Set2Set layer to predict the stiffness tensor of materials.

Winning Team: Aimat

Team Leader: Xiangyu Zhang

Team members: Xiangyu Zhang

Summary:
The team Adapted the CGNN and GeoCGNN models to predict stiffness tensors of materials from their crystal structure

Physical Science

First Prize

Winning Team: MagiXterial

Team Leader: Yifeng Tang

Team members: Qingchuan Yang, Han Xu, Zuochao Zhao, Huishuang Tan

Summary:
Proposed a new stacking model which uses GBDT trees as featurizer followed by a neural network regressor.

Second Prize

Winning Team: Aimat

Team Leader: Xiangyu Zhang

Team members: Xiangyu Zhang

Summary:
The team Adapted the CGNN and GeoCGNN models to predict stiffness tensors of materials from their crystal structure.

Third Prize

Winning Team: CRITICAL

Team Leader: Ke Liu

Team members: Shangde Gao, Kaifan Yang, Yichao Fu

Summary:
The team built a model comprised of input layer, embedding layer, aggregation layer, attention layer and Set2Set layer to predict the stiffness tensor of materials.

Chemistry

First Prize

Winning Team: AI.Rex

Team Leader: Yifeng Tang

Team members: Huishuang Tan, Hanzhang Liu, Jiayu Qin, Wanxiang Shen, Long Qian

Summary:
The team built models to evaluate the reaction feasibility accuractely and efficiently is vital to reduce the number of proposed paths and only retaining those have higher chance of success in wet lab.

Second Prize

Winning Team: TQL

Team Leader: Zheng Cao

Team members: Tiantao Liu

Summary:
The team proposed a synthesis evaluation system to analyze the synthetic accessibility and identify the possible side products.

Third Prize

Winning Team: Chemon

Team Leader: Bangwen Yue

Team members: Long Qian, Zheng Chen

Summary:
The team used RXNmapper, with Transformer learning atomic mapping to achieve 99.4% accuracy with high quality atom map on the 49k strong disequilibrium patent reaction test set.

Proteomics

First Prize

Winning Team: OMX

Team Leader: Wanxiang Shen

Team members: Wanxiang Shen

Summary:
The team established an interpretable xAI-based omics machine learning model and algorithm flow for disease prediction, diagnosis and identification of key markers.

Second Prize

Winning Team: Alpha-Spec

Team Leader: Jian Song

Team members: Liqi Yan

Summary:
The team used an advanced deep learning module, Transformer, and the model was trained for 7 rounds. The deep learning model of Alpha-Spec achieved the recognition of spectral quality based solely on spectra (acc: ~70%).

Third Prize

Winning Team: 蛋黑质组学

Team Leader: Weijie Zhang

Team members: Hongke Hu, Chao Liu, Xinxing Hou

Summary:
The team performed research and evaluation of peptide signal reliability from independent data acquisition based on deep learning.

Special Award

Team Name
Category
Leader
Members
Alpha-DIA
Open
Jian Song
Liqi Yan
蛋黑质组学
Proteomics
Weijie Zhang
Hongke Hu, Chao Liu, Xinxing Hou
Gv_link
Open
Rafeal Li
Rafeal Li
浑水摸鱼队
Open
Genshu You
Dengfeng Luo
BioXsynth
Symthetic Biology
Yifeng Tang
Bangwen Yue, Gen Lu, Fanyuan Zeng, Long Qian
Chemon
Chemistry
Bangwen Yue
Long Qian, Zheng Chen
Proactive matter
Chemistry
Wendong Wang
Yulei Fu, Hengao Yu, Xinli Zhang
Team FGMers
Physical Science
Youlin Zhu
Like Xu, Ruozhuo Liu, Jian Peng
Material Prediction and Design
Open
Saksham Mehla
Saksham Mehla
Prediction of Elasticity of Crystals
Open
Jose Manuel Napoles Duarte
Jose Manuel Napoles Duarte
Automatic Enzyme Sequence Annotation
Open
Nikhil Singh
Nikhil Singh